Reply To: Installing Rosetta Abinitio make_fragments.pl

[Anonymous]

> Hello,
>
> I’m trying to install make_fragments.pl for Rosetta Abinitio. Has anyone had problems obtaining all of the elements for SAM?
>
> The 3.5 version of SAM has:
> target99
> uniqueseq
>
> but lacks:
> predict-2nd
>
> Does anyone know where to get SAM bundled with predict-2nd or is this a separate program?
>
> Thanks,
> Christy

Thanks for the info on the server. I want to run quite a few structures, so I want to install make_fragments locally.

We are also having problems with JUFO. Does anyone know what version of JUFO works with Rosetta3.0?

Thanks,
Christy