Can you change background color of pdb file pictures?

Member Site Forums ROSIE ROSIE – General Can you change background color of pdb file pictures?

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    • #2254
      Anonymous

        In the output of ROSIE docking2 and symmetric_docking jobs,
        many pdb files are shown as cartoons with rainbow coloring
        and black backgrounds. Is it possible to have an option that
        would change the background color of these images to white
        and perhaps render these images with a thin black outline
        around the cartoon shape? I think this would use less toner
        when printing and yield clearer printouts. Also, could you
        include these images in the tar archive one gets via the link
        “[Download all job files as tar archive]” ?

        Thanks!

      • #11130
        Anonymous

          Fig.6C on p.11 of the article below has a white background and looks fine:
          http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3149062/figure/pone-0022477-g006/
          http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3149062/

          Another request is to include the I_sc/RMSD and Score/RMSD plots in the tar archive for a run.

        • #11137
          Anonymous

            Plots images is generated on-the-fly in web browser so thats why they are not includes in tar archive. However: this images generate from score files (included in tar archive) so it is possible to re-plot them if such need arise.

            Currently there is no way change plots background.

          • #11160
            Anonymous

              Thanks for your response, Sergey.

              I hope future versions of ROSIE will include the features I requested above.
              Is this Forum the best place to post such feature requests?
              If not, who should I send them to?

              Thanks again!

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