dihedral_between_bonded_children: atoms are not both my children!

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    • April 5, 2013 at 1:40 pm #1550
      Anonymous

        Hi, while running a homology model on Rosetta 3.4, I get an error

        ERROR: Atom_::dihedral_between_bonded_children: atoms are not both my children!
        ERROR:: Exit from: src/core/kinematics/tree/Atom_.cc line: 407

        Any insights on why that might be?
        Thank you.

      • April 5, 2013 at 4:56 pm #8603
        Anonymous

          You’re trying to calculate a dihedral angle between atoms that aren’t connected by bonds (possibly aren’t connected by AtomTree bonds).

          Are you using any dihedral constraints? Do you have any noncanonicals?

        • April 5, 2013 at 7:13 pm #8605
          Anonymous

            Hi, thank you for the reply.

            I think my issue is close to this one: https://www.rosettacommons.org/content/error-atomdihedralbetweenbondedchildren

            It runs fine with -out:nstruct 5, but crushes with -out:nstruct 10

            I am not using dihedral constraint or noncanonicals.

            Thanks

          • April 5, 2013 at 8:54 pm #8607
            Anonymous

              Unfortunately we weren’t able to duplicate that one in the other thread either…are you also using the demo or using your own system?

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