Epi-Graft Match

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    • October 24, 2013 at 6:56 pm #1738
      Anonymous

        Hi,
        I see the following errors when running epi-graft. What commands do I need to overcome these limits?
        Thank you very much in advance for your help!

        STOP :: MAX_PACK_NEIGHBORS exceeded
        MAX_PACK_NEIGHBORS: 100
        ERROR:: Exit from: pack.cc line: 5280

        STOP:: MAX_HB_PER_ATM exceeded
        ERROR:: Exit from: hbonds.cc line: 665

        STOP:: acc MAX_HB_ATM exceeded
        ERROR:: Exit from: hbonds.cc line: 623

        STOP:: don MAX_HB_ATM exceeded
        ERROR:: Exit from: hbonds.cc line: 635

        *****ERROR TOO MANY CYSTEINES COUNTED*****
        ERROR:: Exit from: disulfides.cc line: 644

      • October 24, 2013 at 7:55 pm #9446
        Anonymous

          How did you produce your input structures, and how big are they? I’m no Rosetta++ expert, but I’m guessing that those error messages are indicating that there’s something wrong with your input files (or simply something that falls outside the use cases considered).

        • October 24, 2013 at 10:17 pm #9447
          Anonymous

            the input structures are several hundred amino acids.

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