How to set options under PyRosetta

[Anonymous]

Hi there,

How to set option values under PyRosetta? for example, hwo can I set such option “-holes:dalphaball /path/to/exec…” for PyRosetta. Usually such setting could be pass to Rosetta in command args.

thanks,
Lenny

[Anonymous]

PyRosetta use it’s own option set/get functions:
void rosetta.core.set_string_option( OPTION_NAME, VALUE )
VALUE rosetta.core.get_string_option( OPTION_NAME )

Here a few usage examples:
import rosetta
rosetta.init()

rosetta.core.set_string_option(‘in:file:frag3’, ‘my_frag3_file’)
print rosetta.core.get_string_option(‘in:file:frag3’)

rosetta.core.set_file_vector_option(‘in:file:s’, rosetta.Vector1())
print rosetta.core.get_file_vector_option(‘in:file:s’)

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