I am interested in protein design with RosettaMatch algorithm. But It is difficult for me to figure out how to use this algorithm in Rosetta 3.1. Is there any introduction or tutorial about how to use RosettaMatch? Any suggestion is welcome.
Although parts of the matcher are present in 3.1, it wasn’t really released in 3.1. Parts are missing (most importantly the executeable). I’d suggest using ++ or waiting for 3.2 (which is getting underway now).
Thanks amlewis! Would you like to give a simple introduction about how to use RosettaMatch algorithm in Rosetta ++ version? I am still confused, although I have gone through the manual for this version.