multiple cst files

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    • March 20, 2013 at 7:16 pm #1534
      Anonymous

        Is there a way to use multiple cst files in a structure calculation? Like this ?

        -constraints:cst_file input/file1.cst
        -constraints:cst_file input/file2.cst

        -constraints:cst_fa_file input/file3_fa.cst
        -constraints:cst_fa_file input/file4_fa.cst

        Or do file1/file2 and file3/file4 have to be concatenated into one file ?

        thank you !
        logan

      • March 20, 2013 at 11:17 pm #8508
        Anonymous

          Off the top of my head, they need to be concatenated. I’ll check. If you want different constraints for different inputs…that may work under the ResourceManager, but that wasn’t released for 3.4 and I don’t think that functionality is there for 3.5.

        • March 20, 2013 at 11:22 pm #8509
          Anonymous

            The option is a StringVector (it should be a FileVector…). For most use cases, if you offer multiple arguments, it actually RANDOMIZES which one it chooses; it certainly does not read them all concatenated by default.

            You may be required to use the format

            -cst_file file1 file2

            over
            -cst_file file1
            -cst_file file2

            to read in multiple – which is an aside because I think you do not want to.

          • March 20, 2013 at 11:25 pm #8510
            Anonymous

              Bug report filed on StringVector v. FileVector (https://carbon.structbio.vanderbilt.edu/mantisbt/view.php?id=224)

            • March 21, 2013 at 12:02 am #8511
              Anonymous

                thank you for investigating ! I will concatenate.

                logan

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