Possible minor mistakes in SetPyRosettaEnvironment.sh (in r21 for Ubuntu)

Member Site Forums PyRosetta PyRosetta – Build/Install Possible minor mistakes in SetPyRosettaEnvironment.sh (in r21 for Ubuntu)

Viewing 1 reply thread
  • Author
    • #1928

        Dear all,

        There may be some minor mistakes in the SetPyRosettaEnvironment.sh in the r21 release of PyRosetta:

        On line 34 “export LD_LIBRARY_PATH=$PYROSETTA/rosetta${LD_LIBRARY_PATH+:$LD_LIBRARY_PATH}”

        $PYROSETTA is not added to the LD_LIBRARY_PATH and “libboost_python.so.1.55.0.so” is consequently not found.


        (Or just move the offending so to rosseta subdir)


        On line 35 “export PYROSETTA_DATABASE=$PYROSETTA/rosetta_database“, but the directory is named just “database”

        Corrected: “export PYROSETTA_DATABASE=$PYROSETTA/database


        And I also had to delete the IPython directory, since on imports it was sometimes picking up the IPython version boundled with PyRosetta and not the 2.0.0 version i had installed systemwide.


        This are all minor issues for the average unix user, but could deter some new users.

        Best regards,


      • #10265

          Sorry for the late replay, this has been fixed in the newest versions of the PyRosetta binaries.

      Viewing 1 reply thread
      • You must be logged in to reply to this topic.