PyRosetta4 installation problem

[Anonymous]

Hi:

I am trying to install Pyrosetta4 with the following system and software settings:

Ubuntu Linux 16.04 LTS 64Bit

Python 2.7.12 (ubuntu default), 64bit

PyRosetta4.Release.python27.ubuntu.release-184

I followed the instructions given on RyRosetta website and typed in the command “cd setup && sudo python setup.py install” in terminal.

An error message quicked showed up as:

Downloading https://pypi.io/packages/source/s/setuptools/setuptools-3.3.zip

Extracting in /tmp/tmp7GOXbq

Now working in /tmp/tmp7GOXbq/setuptools-3.3

Building a Setuptools egg in /home/zuodong/Program/PyRosetta4/PyRosetta4.Release.python27.ubuntu.release-184/setup

/home/zuodong/Program/PyRosetta4/PyRosetta4.Release.python27.ubuntu.release-184/setup/setuptools-3.3-py2.7.egg

Traceback (most recent call last):

  File “setup.py”, line 77, in <module>

    setup_package()

  File “setup.py”, line 61, in setup_package

    version = get_package_version(),

  File “setup.py”, line 36, in get_package_version

    subprocess.check_output([“git”, “rev-parse”, “–show-toplevel”]).strip().decode(),

  File “/usr/lib/python2.7/subprocess.py”, line 567, in check_output

    process = Popen(stdout=PIPE, *popenargs, **kwargs)

  File “/usr/lib/python2.7/subprocess.py”, line 711, in __init__

    errread, errwrite)

  File “/usr/lib/python2.7/subprocess.py”, line 1343, in _execute_child

    raise child_exception

OSError: [Errno 2] No such file or directory

Could anyone give me some suggestions on how to fix the problem? Thank you very much!

zsun12

[Anonymous]

Hi

don’t know if you succeed or not but I had similar issue it  has been fixe following this:

Install basic development packages

This list may not be sufficient and necessary for building Python for PyRosetta. Maybe someone can correct me here:

sudo apt-get install build-essential libbz2-dev libncursesw5-dev libreadline-gplv2-dev libssl-dev libgdbm-dev libc6-dev libsqlite3-dev tk-dev mysql-client libmysqlclient-dev

If this command fails, remove the failed package(s) from the apt-get command line and try again. Take note of those that failed though in case they are needed. You may need libreadline5-dev instead of libreadline-gplv2-dev.

 

This is taken from

https://www.rosettacommons.org/content/trouble-building-pyrosetta-linux-mint-13-maya-64-bit

 

Cheers

JM

[Author]

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