Remodel: neighbor cutoff

This topic has 2 replies, 2 voices, and was last updated 10 years ago by Anonymous.

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- July 16, 2014 at 3:11 pm #1950
  Anonymous
  Hi
  
  I am trying to design and sample a loop using Remodel. Residues that are interacting but farther away than 6 A are not being repacked (using the -find_neighbors) and I would like to increase the cutoff. How can I change this parameter?
  
  thanks in advance
  
  felipet
- July 17, 2014 at 3:59 pm #10165
  Anonymous
  As I read the code, you should be able to adjust the neighbor cutoff distance with the option -pose_metrics:neighbor_by_distance_cutoff
- July 17, 2014 at 5:13 pm #10167
  Anonymous
  it is working!
  
  Thanks a lot
  
  felipet
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