scoring function changed from 2.3?

Member Site Forums Rosetta 3 Rosetta 3 – General scoring function changed from 2.3?

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    • #612

        I evaluated same structure by Rosetta++(2.3.1) and PyRosetta 1.1(the latest miniRosetta), but they provided different total scores. Are there some changes for standard full-atom scoring function since the latest update?

      • #4424

          There are many changes between the 2.3 and 3.x versions of the score function. We believe they are all improvements.

          Some of the specific changes:
          A) count-pair has been modified to be more internally consistent: 3-bond atoms have 0 interaction, 4 bond has .5, and 5+ has full.

          B) some residue pairs used to be spuriously unscored; that’s fixed

          C) the whole etable (fa_rep, fa_atr, solvation) has been smoothed and its “range” lengthened a bit.

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